1. Beautiful Freak (1996)

2. Electro-Shock Blues (1998)

3. Daisies of the Galaxy (2000)

4. Souljacker (2001)

5. I am the Messiah (2002)

6. Shootenanny! (2003)

7. Levity (2003)

8. Blinking Lights and other Revelations (2005)

9. Hombre Lovo (2009)

10. End Times (2010)

11. Tomorrow Morning (2010)

12. Wonderful, Glorious (2013)

13. The Cautionary Tales of Mark Oliver Everett (2014)

14. The Deconstruction (2018)

15. Earth to Dora (2020)

16. Extreme Witchcraft (2022)

17. Eels So Good: Essential Eels, Vol. 2 (2007–2020) (2023)

18. Live at Largo (2023)

19. Gentle Souls: 2021 KCRW Sessions (2023)

20. Eels Time! (2024)